Archive for the ‘Science’ Category

Another Harvard paper retracted – post-doc’s research suspect

October 14, 2010

The paper in NatureSystemic signals regulate ageing and rejuvenation of blood stem cell niches” by Shane R. Mayack, Jennifer L. Shadrach, Francis S. Kim & Amy J. Wagers has been retracted at the request of 3 of the authors.

According to the Boston Globe story the retraction was not signed by Shane R Mayack, the lead author of the article, who was a postdoctoral researcher in Wagers’s laboratory.

The paper, published in January in Nature, examined aging of blood stem cells. The retraction, published yesterday, was signed by Amy Wagers, a stem cell biologist at Joslin Diabetes Center and two of her coauthors.

Joslin spokesman Eric Bender said he could not comment on whether Mayack was still working in the laboratory. The retraction did not explain whether it was an innocent mistake, possible research misconduct, or some other issue — nor did it make clear who, if anyone, was at fault.

Two months ago, Harvard confirmed that a high-profile psychology professor, Marc Hauser, had engaged in eight instances of scientific misconduct, leading to the retraction of one paper he coauthored and raising concerns about two others.




Habitable exoplanet Gleise 581g may not exist

October 13, 2010

 

Artist's impression of the planetary system ar...

Gleise 581 system: Image via Wikipedia

 

An earlier post reported on the finding of a potentially habitable exoplanet.

But the planet may not exist:

Yesterday at an exoplanet meeting in Turin, Italy, Switzerland-based astronomers announced that they could find no trace of the prized planet in their observations of the same planetary system.

All the excitement has been over the subtlest of wiggles in the motion of the star Gliese 581 that lies just 20 light-years from the sun in the direction of the constellation Libra. A consortium of institutions led by the Observatory of Geneva in Switzerland had already discovered four planets circling Gliese 581 by sorting out the subtle motions of the star that are induced by the gravitational tugs of any orbiting planets.

On 29 September, a U.S.-based team led by astronomer Steven Vogt of the University of California, Santa Cruz, announced that it had discovered a fifth planet. The American team used a combined set of observations: One 11-year-long set consisted of 122 measurements made by the team, while the other set was 4.3 years long and consisted of 119 measurements published by the consortium.

Designated Gliese 581g, the new planet has at least three times the mass of Earth—large enough to hold on to a watery atmosphere—and orbits at a distance from its star that would allow any water to remain liquid. That would make 581g a happy home for life as we know it.

But at this week’s Astrophysics of Planetary Systems meeting, astronomer Francesco Pepe of the Geneva Observatory and the Swiss group reported that he and his colleagues could find no reliable sign of a fifth planet in Gliese 581’s habitable zone. They used only their own observations, but they expanded their published data set from what the U.S. group included in its analysis to a length of 6.5 years and 180 measurements. “We do not see any evidence for a fifth planet … as announced by Vogt et al.,” Pepe wrote Science in an e-mail from the meeting. On the other hand, “we can’t prove there is no fifth planet.” No one yet has the required precision in their observations to prove the absence of such a small exoplanet, he notes.

New species found in Madagascar!

October 11, 2010

Where are they all coming from?

From Wired Science:

New, Cat-Sized Carnivore Found in Madagascar

An unknown, mongoose-like creature has been discovered in the wetlands of Madagascar. To the satisfaction of anyone who delights in new species discoveries but wishes they were a bit more charismatic, this cat-sized carnivore’s got heft. Biologists photographed the creature while surveying lemurs in 2004. It resembled the brown-tailed mongoose, an inhabitant of Madagascar’s eastern jungles that was first described in 1837 by French zoologist Isidore Geoffroy Saint-Hilaire.

 

Image: Durrell Wildlife Conservation Trust Salanoia durrelli

 

Further inspection, however, revealed differences between skulls, paws and teeth. The new creature is formally described in the journal Systematics and Biodiversity. Because it was discovered by researchers from the Durrell Wildlife Conservation Trust, founded by naturalist and author Gerald Durrell, the new animal has been named Salanoia durrelli, or the Durrell’s vontsira.

That the vontsira would be found on Madagascar is unsurprising. While most new land-dwelling species are small and easily overlooked, tropical jungles contain Earth’s last few unexplored and uninhabited pockets of terrestrial life. Madagascar is a biodiversity hotspot with no fewer than 15 unique families of animals.

Read More http://www.wired.com/wiredscience/2010/10/durrells-vontsira/#ixzz124iVGNOs

Evaporation from land increased from 1982 to 1998 and then stopped

October 10, 2010

Interesting paper but the headlines it generates are even more interesting.

A new Letter to  Nature:

Recent decline in the global land evapotranspiration trend due to limited moisture supply

Martin Jung et al, NatureDOI:10.1038/nature09396

The authors write:

Our results suggest that global annual evapotranspiration increased on average by 7.1 ± 1.0 millimetres per year per decade from 1982 to 1997. After that, coincident with the last major El Niño event in 1998, the global evapotranspiration increase seems to have ceased until 2008. This change was driven primarily by moisture limitation in the Southern Hemisphere, particularly Africa and Australia.

But the New Scientist in its wisdom reports this under the headline:

Water cycle goes bust as the world gets warmer

That evapotranspiration should decrease if the moisture is not there in the first place seems perfectly reasonable.  That we will have to use technology to get ground water levels back up as water usage increases is also fairly obvious.

It occurs to me that global temperatures have been stable if not declining over the last decade which also fits the period when they measured the stable evapotranspiration.

I note – in passing – that evaporation from ocean surfaces is some 7 times greater than the evaporation from land surfaces while precipitation over the oceans is about 4 times greater than that over land.

But the NS headline is a little bizarre.


Prof. Hal Lewis resigns from the American Physical Society

October 10, 2010

Harold Lewis is Emeritus Professor of Physics, University of California, Santa Barbara, former Chairman; Former member Defense Science Board, chmn of Technology panel; Chairman DSB study on Nuclear Winter; Former member Advisory Committee on Reactor Safeguards; Former member, President’s Nuclear Safety Oversight Committee; Chairman APS study on Nuclear Reactor Safety, Chairman Risk Assessment Review Group; Co-founder and former Chairman of JASON; Former member USAF Scientific Advisory Board; Served in US Navy in WW II; books: Technological Risk (about, surprise, technological risk) and Why Flip a Coin (about decision making)

From: Hal Lewis, University of California, Santa Barbara

To: Curtis G. Callan, Jr., Princeton University, President of the American Physical Society

6 October 2010

Dear Curt:

When I first joined the American Physical Society sixty-seven years ago it was much smaller, much gentler, and as yet uncorrupted by the money flood (a threat against which Dwight Eisenhower warned a half-century ago).

Indeed, the choice of physics as a profession was then a guarantor of a life of poverty and abstinence—it was World War II that changed all that. The prospect of worldly gain drove few physicists. As recently as thirty-five years ago, when I chaired the first APS study of a contentious social/scientific issue, The Reactor Safety Study, though there were zealots aplenty on the outside there was no hint of inordinate pressure on us as physicists. We were therefore able to produce what I believe was and is an honest appraisal of the situation at that time. We were further enabled by the presence of an oversight committee consisting of Pief Panofsky, Vicki Weisskopf, and Hans Bethe, all towering physicists beyond reproach. I was proud of what we did in a charged atmosphere. In the end the oversight committee, in its report to the APS President, noted the complete independence in which we did the job, and predicted that the report would be attacked from both sides. What greater tribute could there be?

How different it is now. The giants no longer walk the earth, and the money flood has become the raison d’être of much physics research, the vital sustenance of much more, and it provides the support for untold numbers of professional jobs. For reasons that will soon become clear my former pride at being an APS Fellow all these years has been turned into shame, and I am forced, with no pleasure at all, to offer you my resignation from the Society.

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Survey and review of integrity at Indian Research Institutions

October 10, 2010

Cases of plagiarism and other scientific misconduct is thought to be increasing in India. The rapid growth in the country in recent years has been mirrored by a growth in the number of research institutions, science publications and number of published papers. The pursuit of advancement of institutional reputations in newly established Universities and the development of personal careers has led to an increased pressure to publish. Scientific funding has not kept pace with the growth of institutions and numbers of people involved in research and this has led to increased competition in the seeking of limited funds. Quality assurance and oversight processes have not kept pace and in many young institutions may even be totally absent. There is little emphasis given to training for scientists or administrators regarding scientific rigour or ethics or integrity.

Indian graduates and scientists are generally highly regarded. There is an increasing focus from outside the country for establishing research and engineering centres in India and for commissioning research at Indian Research Institutions. But there is growing concern about standards and the proper selection and use of Indian scientists and Indian Research Institutions. A need has been expressed for an independent review of the level of integrity at various Institutions.

This need has only been emphasised by the recent high profile cases of plagiarism regarding GM crops where the Minister rejected a report by the 6 top Indian science academies including the Indian National Science Academy and the apparent, wide-spread plagiarism which has, for example, led to the retraction of 3 papers in the Journal Biotechnology Advances.

A survey and review to assess and rank Integrity at Indian Research Institutions has therefore been privately commissioned. The study is to be completed by 1st May 2011 and the first phase of information gathering is expected to continue through February 2011.

Institutions to be included in the survey will be requested individually to make a formal submission.

Institutions or individuals wishing to participate by making unsolicited submissions are invited to do so as detailed in the separate page established here.


Hayabusa particles could be extraterrestrial

October 10, 2010

I posted earlier on the return of the ion engine powered Hayabusa.

Hayabusa started its journey in 2003 and met up with the asteroid Itokawa in 2005. The plan was to fire small metal projectiles at the asteroid to generate small pea size samples of the asteroid. This plan failed when the projectile firing device failed to function. After a long journey the spacecraft returned to Earth in June this year.

The sample capsule released by the Hayabusa asteroid probe. (Mainichi)

The sample capsule released by the Hayabusa asteroid probe. (Mainichi)

 

Though the inner capsule had no mm sized particles as hoped, some dust was found in the sealed container. Until recently, many of the fine particles found in the capsule had been believed to be aluminum powder or dust that had slipped into the capsule on Earth during manufacturing or Hayabusa’s launch reports the Mainichi Daily News.

However, the research team collected some 100 particles that are smaller than 0.001 millimeters in size from the inner cylinder of the capsule, called the “sample catcher,” and concluded some of them may be cosmic materials. The particles, which are invisible to the human eye, were collected by remote control using a special Teflon spatula — about 6 millimeters long and 3 millimeters wide — and examined with an electron microscope. Japan Aerospace Exploration Agency (JAXA) plans to further analyze the samples by splitting each particle and examining their crystal structure at Spring 8, a large-scale synchrotron radiation facility in Hyogo Prefecture, starting next month to determine where they are from. The procedure may also provide new information on the birth of the solar system.

“We cannot yet tell (whether the particles are from Itokawa) from their external features, but we have found many particles and there is a chance (that they are extraterrestrial),” said Munetaka Ueno, a researcher at JAXA’s Institute of Space and Astronautical Science.

Today Mainichi reports that:

Rocky particles (circled) are seen on the tip of a spatula used to scrape materials off of the sample capsule. (Photo courtesy of JAXA).

Rocky particles (circled) are seen on the tip of a spatula used to scrape materials off of the sample capsule. (Photo courtesy of JAXA).

The particles in a sample capsule released by the Hayabusa asteroid probe on its return to Earth were largely rocky materials, researchers have announced. At a lecture of the Japanese Society for Planetary Sciences in Nagoya on Oct. 8, a team of researchers released electron micrographs of the particles that were retrieved from the capsule, reporting that most of them were rocky.

According to the research team, including experts from the Japan Aerospace Exploration Agency (JAXA), they have detected at least 100 particles from the capsule, with most of them measuring less than 0.001 millimeters in size.

Since the rocky particles are diverse in composition, researchers will further inspect them at SPring-8, a large synchrotron radiation facility in Sayo, Hyogo Prefecture, to determine if they are terrestrial or from the asteroid Itokawa.

Chang’e-2 enters final working orbit around the moon.

October 9, 2010

Chang’e-2 has now entered into its final 118 min orbit and formally starts its mission of mapping the moon and preparing the way for Chang’e-3.

http://news.xinhuanet.com/english2010/china/2010-10/09/c_13548648.htm

Chang’e-2, following instructions from the Beijing Aerospace Control Center (BACC), started the third braking at 11:17 a.m. and entered the 118-minute, round working orbit 15 minutes later, changing the satellite’s apolune from 1,825 km to about 100 km, the BACC said. The satellite will begin scientific exploration activities soon.

Chang’e-2 lifted off from the Xichang Satellite Launch Center, in southwest China’s Sichuan Province, on Oct. 1. The moon probe completed its first braking on Wednesday and the second on Friday.

 

 

Unsettled science?

October 9, 2010

 

History of sunspot number observations showing...

Image via Wikipedia

 

Within the space of two days there have been two scientific papers with entirely different conclusions about the effect of the active sun on climate. That there is a difference from two different studies is perfectly normal (and desirable if we are to learn), but what is obvious is the inanity of considering that the effects of solar variations on climate is a “settled science”. Solar Science and Climate are still in the realm of “where we don’t know what we don’t know”.

The first on October 5th, led to the conclusion that:

an increase in solar activity from the Sun actually cools the Earth

The second reported here comes to the conclusion that:

“The contribution of the active sun, indirectly via cosmic rays, to global warming appears to be much stronger than the presently accepted [IPCC] upper limit of 1/3.”

 

????

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Academic Cheating: China and India need to clean up their acts

October 9, 2010

The number of scientific research papers published in India stood at 22,215 in 2007, up from 11,067 a decade earlier.  Chinese academies published a similar number of papers in 1997 — 12,632 but that figure had leapt to 67,433 by 2007.  China in 2007 contributed8.6 percent of the world’s scientific papers while India produced 2.4 percent.

 

Plagiarism

 

Publish or perish is the prevailing paradigm in both countries and plagiarism, data manufacture and manipulation and just downright cheating are endemic to academia. (Plagiarism is rampant in the Indian movie industry and in book publishing as well so academia merely reflects the society at large).

Where cases of plagiarism come to light as with the recent high profile case of plagiarism in reports on GM crops or the cases of plagiarism at IIT-Kanpur, the whitewash committees soon swing into action. Even if sometimes suspended, it does not take long for the parties involved to regain their former positions. CYA prevails.

But the solution does not lie just with correcting institutional processes and better monitoring. A fundamental change in institutional and personal standards of ethics  is required. Academia will need to lead society and not just be sheep.

Just some of the recent cases of academic plagiarism in India and China are given below:

India

  1. Plagiarism: a scourge afflicting the Indian science
  2. Plagiarism plagues India’s genetically modified crops
  3. Biotechnology Advances retracts 3 papers from India for plagiarism
  4. Scientific plagiarism in India
  5. We must restore scientific integrity in Indian research
  6. In India, plagiarism is on the rise
  7. Call for Indian plagiarism watchdog
  8. Copycats from IIT-Kanpur?

China

  1. Do plagiarism, fraud, and retractions make it more difficult trust research from China?
  2. Rampant Fraud Threat to China’s Brisk Ascent.
  3. Scientists behaving badly; Recent events show China needs to clean up its scientific act.
  4. Academic corruption undermining higher education: Yau Shing-tung.
  5. CHINA: Universities fail to tackle plagiarism.
  6. In China, academic cheating is rampant; Some say practice harmful to nation.
  7. CHINA: Professor sacked for academic plagiarism
  8. Nearly half of China’s science workers think academic cheating is “common”.